Stem-loop oha-mir-15a

Accession

MI0031366

Description

Ophiophagus hannah oha-mir-15a precursor miRNA

Sequence

ucuggaagccucagaguacuaUAGCAGCACAUCAUGAUUUGUguuucauaauaaauaugCAAGUCAUUAUUUGCUGCUUUagaauuuuaaggaagaaaa
........(((.(((((.(((.(((((((.((.(((((((((((............))))))))))).)).))))))).))).))))).))).......

Structure

ucuggaag   c     a   U       C  C           uucau 
        ccu agagu cua AGCAGCA AU AUGAUUUGUgu     a
        ||| ||||| ||| ||||||| || |||||||||||      
        gga uuuua gaU UCGUCGU UA UACUGAACgua     a
-aaaagaa   a     a   U       U  U           uaaau 

Annotation confidence Not enough data

Genome context

AZIM01000178.1: 249265-249363 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-15a

Mature oha-miR-15a-5p

• Accession: MIMAT0036740
• Description: Ophiophagus hannah oha-miR-15a-5p mature miRNA
• Sequence: 22 - UAGCAGCACAUCAUGAUUUGU - 42
• Evidence: not_experimental

Mature oha-miR-15a-3p

• Accession: MIMAT0036741
• Description: Ophiophagus hannah oha-miR-15a-3p mature miRNA
• Sequence: 60 - CAAGUCAUUAUUUGCUGCUUU - 80
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656