Stem-loop oha-mir-144

Accession

MI0031357

Description

Ophiophagus hannah oha-mir-144 precursor miRNA

Sequence

uccagcucGGAUAUCAUCAUAUACUGUAAGUuggaaucagacacUACAGUAUAGAUGAUGUACUAucugg
.((((.....((((((((.(((((((((.((.(........)))))))))))))))))))).....))))

Structure

u    cucGG        A         A  u gaa 
 ccag     AUAUCAUC UAUACUGUA GU g   u
 ||||     |||||||| ||||||||| || |    
 gguc     UGUAGUAG AUAUGACAU ca c   c
-    uAUCA        -         -  - aga 

Annotation confidence Not enough data

Genome context

AZIM01003573.1: 17943-18012 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-144

Mature oha-miR-144-5p

• Accession: MIMAT0036725
• Description: Ophiophagus hannah oha-miR-144-5p mature miRNA
• Sequence: 9 - GGAUAUCAUCAUAUACUGUAAGU - 31
• Evidence: not_experimental

Mature oha-miR-144-3p

• Accession: MIMAT0036726
• Description: Ophiophagus hannah oha-miR-144-3p mature miRNA
• Sequence: 45 - UACAGUAUAGAUGAUGUACUA - 65
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656