Stem-loop oha-mir-139

Accession

MI0031352

Description

Ophiophagus hannah oha-mir-139 precursor miRNA

Sequence

cugguuguauUCUACAGUGCAUGUGUCUCCAGCGuguuuaagcagcUGGAGAUACGGCCCUGUUGGAauaacagccg
..(((((((((((((((.((.((((((((((((.(((....))))))))))))))))).))).)))))).)))))).

Structure

cu      -      -   U  A            G   u 
  gguugu auUCUA CAG GC UGUGUCUCCAGC ugu u
  |||||| |||||| ||| || |||||||||||| |||  
  ccgaca uaAGGU GUC CG GCAUAGAGGUcg acg a
-g      a      U   C  -            -   a 

Annotation confidence Not enough data

Genome context

AZIM01006393.1: 6852-6928 [+]

Mature oha-miR-139-5p

• Accession: MIMAT0036715
• Description: Ophiophagus hannah oha-miR-139-5p mature miRNA
• Sequence: 11 - UCUACAGUGCAUGUGUCUCCAGCG - 34
• Evidence: not_experimental

Mature oha-miR-139-3p

• Accession: MIMAT0036716
• Description: Ophiophagus hannah oha-miR-139-3p mature miRNA
• Sequence: 47 - UGGAGAUACGGCCCUGUUGGA - 67
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656