miRBase entry: tch-mir-193a-2

Stem-loop tch-mir-193a-2


Accession
MI0031268
Description
Tupaia chinensis tch-mir-193a-2 precursor miRNA


Sequence

2150 reads, 7.0 reads per million, 28 experiments
UGGGUCUUUGCGGGCAAGAUGAggguguugguucAACUGGCCUACAAAGUCCCAGU
((((.(((((.((((.((.((((........)))).)).)))).))))).))))..

Structure
--    U     C    A  A    ggu 
  UGGG CUUUG GGGC AG UGAg   g
  |||| ||||| |||| || ||||    
  ACCC GAAAC UCCG UC Acuu   u
UG    U     A    G  A    ggu 


Annotation confidence High
Do you think this miRNA is real?

Genome context
KB320856.1: 288494-288549 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-193a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-193a-5p

Accession MIMAT0059106
Description Tupaia chinensis tch-miR-193a-5p mature miRNA
Sequence 1 - UGGGUCUUUGCGGGCAAGAUGA - 22
Evidence experimental
Illumina [1]

Mature tch-miR-193a-3p

Accession MIMAT0036584
Description Tupaia chinensis tch-miR-193a-3p mature miRNA
Sequence 35 - AACUGGCCUACAAAGUCCCAGU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254