Stem-loop tch-mir-532

Accession

MI0031257

Description

Tupaia chinensis tch-mir-532 precursor miRNA

Sequence

124297 reads, 516.0 reads per million, 30 experiments

CAUGCCUUGAGUGUAGGACCGUuggcaucuuaauuacCCUCCCACACCCAAGGCUUGCA
((.((((((.((((.(((..((.............))..))).)))).)))))).))..

Structure

--  U      A    A   CC  uggca 
  CA GCCUUG GUGU GGA  GU     u
  || |||||| |||| |||  ||     c
  GU CGGAAC CACA CCU  ca     u
AC  U      C    C   CC  uuaau 

Annotation confidence High

Genome context

KB362223.1: 301777-301835 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-532

Mature tch-miR-532-5p

• Accession: MIMAT0036591
• Description: Tupaia chinensis tch-miR-532-5p mature miRNA
• Sequence: 1 - CAUGCCUUGAGUGUAGGACCGU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-532-3p

• Accession: MIMAT0059113
• Description: Tupaia chinensis tch-miR-532-3p mature miRNA
• Sequence: 38 - CCUCCCACACCCAAGGCUUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254