Stem-loop tch-mir-9-3

Accession

MI0031250

Description

Tupaia chinensis tch-mir-9-3 precursor miRNA

Sequence

31819059 reads, 131822.0 reads per million, 30 experiments

UCUUUGGUUAUCUAGCUGUAUGAgugguguggagucuucAUAAAGCUAGAUAACCGAAAGU
..(((((((((((((((.((((((.(.(....).).)))))).)))))))))))))))...

Structure

-UC               G      u g g 
   UUUGGUUAUCUAGCU UAUGAg g u u
   ||||||||||||||| |||||| | |  
   AAGCCAAUAGAUCGA AUAcuu u a g
UGA               A      c g g 

Annotation confidence High

Genome context

KB320890.1: 825879-825939 [-]

Mature tch-miR-9-5p

• Accession: MIMAT0036524
• Description: Tupaia chinensis tch-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-9-3p

• Accession: MIMAT0059047
• Description: Tupaia chinensis tch-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254