Stem-loop tch-mir-140

Accession

MI0031220

Description

Tupaia chinensis tch-mir-140 precursor miRNA

Sequence

432877 reads, 1771.0 reads per million, 30 experiments

CAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGACa
..(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))).....

Structure

---CA             A       u  c  c 
     GUGGUUUUACCCU UGGUAGg ua gu  
     ||||||||||||| ||||||| || || a
     CACCAAGAUGGGA ACCAucu gu cg  
aCAGG             C       u  -  u 

Annotation confidence High

Genome context

KB320983.1: 2385670-2385732 [+]

Mature tch-miR-140-5p

• Accession: MIMAT0036560
• Description: Tupaia chinensis tch-miR-140-5p mature miRNA
• Sequence: 1 - CAGUGGUUUUACCCUAUGGUAG - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-140-3p

• Accession: MIMAT0059082
• Description: Tupaia chinensis tch-miR-140-3p mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254