miRBase entry: tch-mir-497

Stem-loop tch-mir-497


Accession
MI0031218
Description
Tupaia chinensis tch-mir-497 precursor miRNA


Sequence

66810 reads, 257.0 reads per million, 30 experiments
CAGCAGCACACUGUGGUUUGUacggcacuguggccacgucCAAACCACACUGUGGUGUUaga
.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).))))...

Structure
--C    G    C         U  --   ac 
   AGCA CACA UGUGGUUUG ac  ggc  u
   |||| |||| ||||||||| ||  |||   
   UUGU GUGU ACACCAAAC ug  ccg  g
aga    G    C         c  ca   gu 


Annotation confidence Medium
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Genome context
KB320771.1: 1661137-1661198 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tch-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tch-miR-497-5p

Accession MIMAT0036558
Description Tupaia chinensis tch-miR-497-5p mature miRNA
Sequence 1 - CAGCAGCACACUGUGGUUUGU - 21
Evidence experimental
Illumina [1]

Mature tch-miR-497-3p

Accession MIMAT0059080
Description Tupaia chinensis tch-miR-497-3p mature miRNA
Sequence 41 - CAAACCACACUGUGGUGUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254