Stem-loop tch-mir-193b

Accession

MI0031191

Description

Tupaia chinensis tch-mir-193b precursor miRNA

Sequence

28649 reads, 93.0 reads per million, 29 experiments

CGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCU
((((((((((.((((.((.((.((.........)).)).)).)))).))))))))))..

Structure

--          A    G  A  A  uua 
  CGGGGUUUUG GGGC AG UG gu   u
  |||||||||| |||| || || ||   g
  GCCCUGAAAC CCCG UC Ac ua   u
UC          A    G  A  c  uuu 

Annotation confidence High

Genome context

KB320604.1: 5380778-5380836 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-193b

Mature tch-miR-193b-5p

• Accession: MIMAT0059055
• Description: Tupaia chinensis tch-miR-193b-5p mature miRNA
• Sequence: 1 - CGGGGUUUUGAGGGCGAGAUGA - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-193b-3p

• Accession: MIMAT0036532
• Description: Tupaia chinensis tch-miR-193b-3p mature miRNA
• Sequence: 38 - AACUGGCCCACAAAGUCCCGCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254