Stem-loop tch-mir-181d

Accession

MI0031187

Description

Tupaia chinensis tch-mir-181d precursor miRNA

Sequence

458963 reads, 1928.0 reads per million, 30 experiments

AACAUUCAUUGUUGUCGGUGGGUugugaggacggagcccagacCCACCGGGGGAUGAAUGUCAc
.(((((((((....((((((((((.((.((......))))))))))))))..)))))))))...

Structure

--A         GUUG          g  a  ac 
   ACAUUCAUU    UCGGUGGGUu ug gg  g
   |||||||||    |||||||||| || ||   
   UGUAAGUAG    GGCCACCcag ac cc  g
cAC         --GG          -  -  ga 

Annotation confidence High

Genome context

KB358908.1: 1331427-1331490 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-181d

Mature tch-miR-181d-5p

• Accession: MIMAT0036528
• Description: Tupaia chinensis tch-miR-181d-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGUUGUCGGUGGGU - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-181d-3p

• Accession: MIMAT0059051
• Description: Tupaia chinensis tch-miR-181d-3p mature miRNA
• Sequence: 44 - CCACCGGGGGAUGAAUGUCA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254