Stem-loop tch-mir-19b-1

Accession

MI0031179

Description

Tupaia chinensis tch-mir-19b-1 precursor miRNA

Sequence

184634 reads, 758.0 reads per million, 30 experiments

AGUUUUGCAGGUUUGCAUCCAGCugugugauauucugcUGUGCAAAUCCAUGCAAAACUGA
(((((((((((((((((..((((.............)))))))))).)).)))))))))..

Structure

--         -  -      UC    ugugu 
  AGUUUUGCA GG UUUGCA  CAGC     g
  ||||||||| || ||||||  ||||     a
  UCAAAACGU CC AAACGU  GUcg     u
AG         A  U      --    ucuua 

Annotation confidence High

Genome context

KB320410.1: 3473759-3473819 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from tch-mir-19b-1

Mature tch-miR-19b-1-5p

• Accession: MIMAT0059043
• Description: Tupaia chinensis tch-miR-19b-1-5p mature miRNA
• Sequence: 1 - AGUUUUGCAGGUUUGCAUCCAGC - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-19b-3p

• Accession: MIMAT0036521
• Description: Tupaia chinensis tch-miR-19b-3p mature miRNA
• Sequence: 39 - UGUGCAAAUCCAUGCAAAACUGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254