Stem-loop tch-mir-107

Accession

MI0031166

Description

Tupaia chinensis tch-mir-107 precursor miRNA

Sequence

688317 reads, 2803.0 reads per million, 30 experiments

AGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAU
((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))..

Structure

--    U  U           C   u   a 
  AGCU CU UACAGUGUUGC UUG ggc u
  |||| || ||||||||||| ||| ||| g
  UCGG GA AUGUUACGACG Aac uug g
UA    -  C           -   -   a 

Annotation confidence High

Genome context

KB320639.1: 1831420-1831477 [-]

Mature tch-miR-107-5p

• Accession: MIMAT0059030
• Description: Tupaia chinensis tch-miR-107-5p mature miRNA
• Sequence: 1 - AGCUUCUUUACAGUGUUGCCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-107-3p

• Accession: MIMAT0036508
• Description: Tupaia chinensis tch-miR-107-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254