miRBase entry: tch-mir-296

Stem-loop tch-mir-296


Accession
MI0031161
Description
Tupaia chinensis tch-mir-296 precursor miRNA


Sequence

5583 reads, 22.0 reads per million, 30 experiments
AGGGCCCCCCCUCAAUCCUGUUGugcuugguucaGAGGGUUGGGUGGAGGCUCU
((((((.((.(((((((((.(((.((...)).)))))))))))).)).))))))

Structure
      C  C         G   u  u 
AGGGCC CC CUCAAUCCU UUG gc  
|||||| || ||||||||| ||| || u
UCUCGG GG GGGUUGGGA Gac ug  
      A  U         -   u  g 


Annotation confidence High
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Genome context
KB320472.1: 963609-963662 [+]

Database links

Mature tch-miR-296-5p

Accession MIMAT0059025
Description Tupaia chinensis tch-miR-296-5p mature miRNA
Sequence 1 - AGGGCCCCCCCUCAAUCCUGUUG - 23
Evidence experimental
Illumina [1]

Mature tch-miR-296-3p

Accession MIMAT0036504
Description Tupaia chinensis tch-miR-296-3p mature miRNA
Sequence 35 - GAGGGUUGGGUGGAGGCUCU - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24314655
    microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
    "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
    "Virology (2014) 448:247-254