Stem-loop tch-mir-505

Accession

MI0031155

Description

Tupaia chinensis tch-mir-505 precursor miRNA

Sequence

20538 reads, 77.0 reads per million, 30 experiments

GGGAGCCAGGAAGUAUUGAUGUUucugccaguuuagCGUCAACACUUGCUGGUUUCCU
(((((((((.((((.((((((((...........)))))))).)))).))))))))).

Structure

-         G    A        ucug 
 GGGAGCCAG AAGU UUGAUGUU    c
 ||||||||| |||| ||||||||    c
 CCUUUGGUC UUCA AACUGCga    a
U         G    C        uuug 

Annotation confidence High

Genome context

KB321176.1: 1905761-1905818 [+]

Mature tch-miR-505-5p

• Accession: MIMAT0059020
• Description: Tupaia chinensis tch-miR-505-5p mature miRNA
• Sequence: 1 - GGGAGCCAGGAAGUAUUGAUGUU - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-505-3p

• Accession: MIMAT0036499
• Description: Tupaia chinensis tch-miR-505-3p mature miRNA
• Sequence: 37 - CGUCAACACUUGCUGGUUUCCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254