Stem-loop tch-mir-143

Accession

MI0031135

Description

Tupaia chinensis tch-mir-143 precursor miRNA

Sequence

7653717 reads, 25530.0 reads per million, 30 experiments

aGGUGCAGUGCUGCAUCUCUGGUcaguugggagucUGAGAUGAAGCACUGUAGCUCg
((.(((((((((.((((((.((((......)).)).)))))).))))))))).))..

Structure

--  G         G      U  -  ag 
  aG UGCAGUGCU CAUCUC GG Uc  u
  || ||||||||| |||||| || ||   
  UC AUGUCACGA GUAGAG cu ag  u
gC  G         A      U  g  gg 

Annotation confidence High

Genome context

KB320740.1: 862383-862439 [+]

Mature tch-miR-143-5p

• Accession: MIMAT0059003
• Description: Tupaia chinensis tch-miR-143-5p mature miRNA
• Sequence: 2 - GGUGCAGUGCUGCAUCUCUGGU - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-143-3p

• Accession: MIMAT0036476
• Description: Tupaia chinensis tch-miR-143-3p mature miRNA
• Sequence: 36 - UGAGAUGAAGCACUGUAGCUC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254