Stem-loop tch-mir-125a

Accession

MI0031133

Description

Tupaia chinensis tch-mir-125a precursor miRNA

Sequence

5444658 reads, 21656.0 reads per million, 30 experiments

UCCCUGAGACCCUUUAACCUGUgaggauguccagggucACAGGUGAGGUUCUUGGGAG
((((.((((.((((..((((((((((....))....)))))))))))).)))))))).

Structure

-    U    C    UA        ----  a 
 UCCC GAGA CCUU  ACCUGUga    gg u
 |||| |||| ||||  ||||||||    ||  
 AGGG UUCU GGAG  UGGACAcu    cc g
G    -    U    --        ggga  u 

Annotation confidence High

Genome context

KB321018.1: 123734-123791 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-mir-125a

Mature tch-miR-125a-5p

• Accession: MIMAT0036474
• Description: Tupaia chinensis tch-miR-125a-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUUUAACCUGU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-125a-3p

• Accession: MIMAT0059000
• Description: Tupaia chinensis tch-miR-125a-3p mature miRNA
• Sequence: 39 - ACAGGUGAGGUUCUUGGGAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254