Stem-loop tch-mir-142

Accession

MI0031129

Description

Tupaia chinensis tch-mir-142 precursor miRNA

Sequence

46916 reads, 187.0 reads per million, 30 experiments

CAUAAAGUAGAAAGCACUACUaacagcaauggaggguGUAGUGUUUCCUACUUUAUGGA
((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))..

Structure

--          A         Uaa ag a 
  CAUAAAGUAG AAGCACUAC   c  c a
  |||||||||| |||||||||   |  |  
  GUAUUUCAUC UUUGUGAUG   g  g u
AG          C         -ug ga g 

Annotation confidence High

Genome context

KB320868.1: 1712055-1712113 [+]

Mature tch-miR-142-5p

• Accession: MIMAT0058996
• Description: Tupaia chinensis tch-miR-142-5p mature miRNA
• Sequence: 1 - CAUAAAGUAGAAAGCACUACU - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-142-3p

• Accession: MIMAT0036470
• Description: Tupaia chinensis tch-miR-142-3p mature miRNA
• Sequence: 38 - GUAGUGUUUCCUACUUUAUGGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254