Accession
MI0031108
Description
Pongo pygmaeus
ppy-mir-518a-2 precursor miRNA
Sequence
cuggagcaagaagaucucaugcugugacuCUGCAAAGGGAAGCCCUUUCugcugucuaaaagaaaaGAAAGCGCUUCCCUUUGGAGUGuuacgguuugagaaaagcagcguugaag
.....((.......(((((.((((((((.((.(((((((((((.((((((....(((...)))..)))))).))))))))))).)).)))))))).)))))......)).......
.....((.......(((((.((((((((.((.(((((((((((.((((((....(((...)))..)))))).))))))))))).)).)))))))).)))))......)).......
Structure
--cugga aagaaga u u G C gcug a
gc ucuca gcugugac CU CAAAGGGAAGC CUUUCu ucu
|| ||||| |||||||| || ||||||||||| |||||| ||| a
cg agagu uggcauuG GA GUUUCCCUUCG GAAAGa aga
gaaguug -acgaaa u U G C --aa a
Annotation confidence
Not enough data
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Genome context
chr19: 55536834-55536949 [+]
Clustered miRNAs
6 other miRNAs are < 10 kb from ppy-mir-518a-2
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ppy-miR-518a-5p
| Accession | MIMAT0015951 |
| Description | Pongo pygmaeus ppy-miR-518a-5p mature miRNA |
| Sequence | 30 - CUGCAAAGGGAAGCCCUUUC - 49 |
| Evidence | not_experimental |
Mature ppy-miR-518a-3p
| Accession | MIMAT0015952 |
| Description | Pongo pygmaeus ppy-miR-518a-3p mature miRNA |
| Sequence | 67 - GAAAGCGCUUCCCUUUGGAGUG - 88 |
| Evidence | not_experimental |
References
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