Stem-loop gma-MIR319q

Accession

MI0031060

Description

Glycine max gma-MIR319q precursor miRNA

Literature search

17 open access papers mention gma-MIR319q
(43 sentences)

Sequence

31923172 reads, 99061.0 reads per million, 178 experiments

gagagugaAGGAGUUUCCCUCAGCCCAUUCauggauauaaugaaagauuggguugcugaauuaacugauucauucauacaauaguauucaauuaggguaauauugugugaaugaagagaguauaguaucuauauuggaacccccucuuucucugugcuUGGACUGAAGGGAGCUCCUUCuuuuu
(((((.((((((((((((.((((.(((..((((((......((((((..(((((.(........((..(((((((((((((((.(((((.....))))).))))))))))))))).))(((((((...)))))))).)))))..))))))))))))..))).)))).)))))))))))))))))

Structure

     u            C    C   UU      uauaau      uu     g ---------ugaauuaa  ga               g     a 
gagag gaAGGAGUUUCC UCAG CCA  Caugga      gaaaga  ggguu c                 cu  uucauucauacaaua uauuc a
||||| |||||||||||| |||| |||  ||||||      ||||||  ||||| |                 ||  ||||||||||||||| ||||| u
uuuuu CUUCCUCGAGGG AGUC GGU  gugucu      cuuucu  cccaa g                 ga  aaguaaguguguuau auggg u
     -            A    A   uc      ------      cc     g uuauaucuaugauauga  -g               a     a 

Annotation confidence High

Genome context

Unknown

Mature gma-miR319q-5p

• Accession: MIMAT0054465
• Description: Glycine max gma-miR319q-5p mature miRNA
• Sequence: 9 - AGGAGUUUCCCUCAGCCCAUUC - 30
• Evidence: experimental ; unknown

Mature gma-miR319q-3p

• Accession: MIMAT0036398
• Description: Glycine max gma-miR319q-3p mature miRNA
• Sequence: 159 - UGGACUGAAGGGAGCUCCUUC - 179
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153