Stem-loop gma-MIR319p

Accession

MI0031041

Description

Glycine max gma-MIR319p precursor miRNA

Literature search

17 open access papers mention gma-MIR319p
(43 sentences)

Sequence

23315111 reads, 72705.0 reads per million, 178 experiments

gaaauggGAGUUCCUUGCAGCCCAAAGCuucaaggaugaaauucuuccugcggUUUUGGACUGAAGGGAGCUCCuacuu
....((((((((((((.(((.((((((((.((.(((.((...)).))))).)))))))).))).))))))))))))...

Structure

gaaa            G   C        u  a   u  a 
    uggGAGUUCCUU CAG CCAAAGCu ca gga ga  
    |||||||||||| ||| |||||||| || ||| || a
    auCCUCGAGGGA GUC GGUUUUgg gu ccu cu  
-uuc            A   A        c  -   u  u 

Annotation confidence High

Genome context

chr6: 22789766-22789844 [+]

Mature gma-miR319p-5p

• Accession: MIMAT0054447
• Description: Glycine max gma-miR319p-5p mature miRNA
• Sequence: 8 - GAGUUCCUUGCAGCCCAAAGC - 28
• Evidence: experimental ; unknown

Mature gma-miR319p-3p

• Accession: MIMAT0036379
• Description: Glycine max gma-miR319p-3p mature miRNA
• Sequence: 54 - UUUUGGACUGAAGGGAGCUCC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153