Stem-loop gma-MIR9738

Accession

MI0031020

Description

Glycine max gma-MIR9738 precursor miRNA

Sequence

3965 reads, 15.0 reads per million, 169 experiments

gcgauggaAGAGUUCAUGUCGUGUUUCAGAAUgauucagacaucuaagaaggucauucagauguuguugaagacauauacaguuagaaaugacccucucauuuugugccauaaccgucuauuucuucaaugauacuggaaucauucUGAAACAUGAUGUGGACUCUUCcaugg
.(.((((((((((((((((((((((((((((((((((.(((.((...))..)))...(((.((((((((((((.(((.((.(((((((((((.....)))))))......)))).)).))).))))))))))))))))))))))))))))))))))))))))))))))))).)

Structure

g g                                  agacaucuaagaaggucauu   a            c   u  a    ------       c 
 c auggaAGAGUUCAUGUCGUGUUUCAGAAUgauuc                    cag uguuguugaaga aua ac guua      gaaauga c
 | ||||||||||||||||||||||||||||||||||                    ||| |||||||||||| ||| || ||||      ||||||| c
 g uacCUUCUCAGGUGUAGUACAAAGUcuuacuaag                    guc auaguaacuucu uau ug caau      uuuuacu u
- g                                  --------------------   -            u   c  c    accgug       c 

Annotation confidence Low

Genome context

chr16: 32364380-32364552 [+]

Mature gma-miR9738-5p

• Accession: MIMAT0054428
• Description: Glycine max gma-miR9738-5p mature miRNA
• Sequence: 9 - AGAGUUCAUGUCGUGUUUCAGAAU - 32
• Evidence: experimental ; unknown

Mature gma-miR9738-3p

• Accession: MIMAT0036358
• Description: Glycine max gma-miR9738-3p mature miRNA
• Sequence: 147 - UGAAACAUGAUGUGGACUCUUC - 168
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153