Stem-loop gma-MIR9729

Accession

MI0031009

Description

Glycine max gma-MIR9729 precursor miRNA

Sequence

3153 reads, 27.0 reads per million, 149 experiments

uucaaGUAAUGAGUAGAAACAUUUAGAAGaguucgguuacgcaauaauaaugauaucucugaaaguugaauuuguauuuugcuugaaaguauUUAAUUUUUGUAAAUGUUuuuacucauuauuagguc
....(((((((((((((((((((((.((((((((..(((.((((.((((..(((.((..........)))))..)))))))).)))..).....))))))).))))))))))))))))))))).....

Structure

-uuca                     G       ----- gg   c    u    au   a  ucug 
     aGUAAUGAGUAGAAACAUUUA AAGaguu     c  uua gcaa aaua  gau uc    a
     ||||||||||||||||||||| |||||||     |  ||| |||| ||||  ||| ||     
     uuauuacucauuuUUGUAAAU UUUUUAA     g  agu cguu uuau  uua ag    a
cugga                     G       UUuau aa   u    -    gu   -  uuga 

Annotation confidence Medium

Genome context

chr16: 30067721-30067848 [-]

Mature gma-miR9729-5p

• Accession: MIMAT0036347
• Description: Glycine max gma-miR9729-5p mature miRNA
• Sequence: 6 - GUAAUGAGUAGAAACAUUUAGAAG - 29
• Evidence: experimental ; Illumina [1]

Mature gma-miR9729-3p

• Accession: MIMAT0054418
• Description: Glycine max gma-miR9729-3p mature miRNA
• Sequence: 93 - UUAAUUUUUGUAAAUGUU - 110
• Evidence: experimental ; unknown

References

1. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153