Stem-loop dvi-mir-9707-2

Accession

MI0030959

Description

Drosophila virilis dvi-mir-9707-2 precursor miRNA

Sequence

aaacaaaauauauauuUGCCAAGUAUGCAGCACGUUGAaguuguucucguugucacAACGCAUUGCAUACAUGACAAAuuuuguuaauuugua
..(((((.((...(((((.((.((((((((..(((((..................)))))..)))))))).)).))))).....)).))))).

Structure

aa     a  --uau     C  A        CA     Aaguuguu 
  acaaa ua     auuUG CA GUAUGCAG  CGUUG        c
  ||||| ||     ||||| || ||||||||  |||||         
  uguuu au     uAAAC GU CAUACGUU  GCAAc        u
-a     a  uguuu     A  A        AC     acuguugc 

Annotation confidence Not enough data

Genome context

scaffold_12963: 330393-330485 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-9707-2

Mature dvi-miR-9707-5p

• Accession: MIMAT0039266
• Description: Drosophila virilis dvi-miR-9707-5p mature miRNA
• Sequence: 17 - UGCCAAGUAUGCAGCACGUUGA - 38
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9707-3p

• Accession: MIMAT0039267
• Description: Drosophila virilis dvi-miR-9707-3p mature miRNA
• Sequence: 57 - AACGCAUUGCAUACAUGACAAA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250