Stem-loop der-mir-9683

Accession

MI0030931

Description

Drosophila erecta der-mir-9683 precursor miRNA

Sequence

49539 reads, 334.0 reads per million, 19 experiments

AUUCUUAUUCGGUCCGCUUCUGcaaaguuuuuauugCAGCGUGUCAAAUGAGAAAGUU
.((((((((.((..(((..((((((........)))))).))))).))))))))....

Structure

---A        C  UC   UU      agu 
    UUCUUAUU GG  CGC  CUGcaa   u
    |||||||| ||  |||  ||||||    
    AAGAGUAA CU  GUG  GACguu   u
UUGA        A  --   -C      auu 

Annotation confidence High

Genome context

scaffold_4690: 9672360-9672417 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from der-mir-9683

Mature der-miR-9683-5p

• Accession: MIMAT0039220
• Description: Drosophila erecta der-miR-9683-5p mature miRNA
• Sequence: 1 - AUUCUUAUUCGGUCCGCUUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature der-miR-9683-3p

• Accession: MIMAT0039221
• Description: Drosophila erecta der-miR-9683-3p mature miRNA
• Sequence: 37 - CAGCGUGUCAAAUGAGAAAGUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250