Stem-loop dya-mir-978

Accession

MI0030907

Description

Drosophila yakuba dya-mir-978 precursor miRNA

Sequence

gugggcggcacagccagCACUCUACGCCGCUGGCUUACGUuguacucggaaaucGUGUCCAGUGCCGUUGAUUGcaguuguguggacgcaaa
(((..(.(((((((..(((.((.(((.((((((..((((..............)))).)))))).))).)).))).))))))).).)))...

Structure

---   gg g       ca   C  U   C      CU    Uuguac 
   gug  c gcacagc  gCA UC ACG CGCUGG  UACG      u
   |||  | |||||||  ||| || ||| ||||||  ||||       
   cgc  g uguguug  cGU AG UGC GUGACC  GUGc      c
aaa   -a g       -a   U  U   C      -U    uaaagg 

Annotation confidence Low

Genome context

chrX: 11883759-11883850 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from dya-mir-978

Mature dya-miR-978-5p

• Accession: MIMAT0039179
• Description: Drosophila yakuba dya-miR-978-5p mature miRNA
• Sequence: 18 - CACUCUACGCCGCUGGCUUACGU - 40
• Evidence: experimental ; Illumina [1]

Mature dya-miR-978-3p

• Accession: MIMAT0039180
• Description: Drosophila yakuba dya-miR-978-3p mature miRNA
• Sequence: 55 - GUGUCCAGUGCCGUUGAUUG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250