miRBase entry: dse-mir-303

Stem-loop dse-mir-303


Accession
MI0030872
Description
Drosophila sechellia dse-mir-303 precursor miRNA


Sequence

ucuugcuUUGGCUUUAAAGGAAUCUAGUUugauuacgaaaacUAGUUUCCUCUAAGGUUUUAAAcauuaca
.........(((((((.(((((.(((((((........))))))).))))).)))))))............

Structure
---ucuugcuUU       A     U       gau 
            GGCUUUA AGGAA CUAGUUu   u
            ||||||| ||||| |||||||    
            UUGGAAU UCCUU GAUcaaa   a
acauuacAAAUU       C     U       agc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_4: 2464338-2464408 [+]
Clustered miRNAs
7 other miRNAs are < 10 kb from dse-mir-303
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dse-miR-303-5p

Accession MIMAT0039134
Description Drosophila sechellia dse-miR-303-5p mature miRNA
Sequence 8 - UUGGCUUUAAAGGAAUCUAGUU - 29
Evidence experimental
Illumina [1]

Mature dse-miR-303-3p

Accession MIMAT0039135
Description Drosophila sechellia dse-miR-303-3p mature miRNA
Sequence 43 - UAGUUUCCUCUAAGGUUUUAAA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24985917
    Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
    "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
    "Genome Res (2014) 24:1236-1250