miRBase entry: dsi-mir-9369

Stem-loop dsi-mir-9369

Accession

MI0030860

Description

Drosophila simulans dsi-mir-9369 precursor miRNA

Sequence

AGCGAGAGGGUAUUAUGUAUUCauauuuauaaaaucaggAUACAUAUUCUUCUUUGGCUUu
(((.((((((...(((((((((..((((...))))..)))))))))...)))))).)))..

Structure

--   G      UAU         au    a 
  AGC AGAGGG   UAUGUAUUC  auuu  
  ||| ||||||   |||||||||  |||| u
  UCG UUUCUU   AUACAUAgg  uaaa  
uU   G      CUU         ac    a

Annotation confidence Not enough data

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Genome context

chrX: 15011138-15011198 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-9369

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-9369-5p

Accession	MIMAT0039118
Description	Drosophila simulans dsi-miR-9369-5p mature miRNA
Sequence	1 - AGCGAGAGGGUAUUAUGUAUUC - 22
Evidence	experimental Illumina [1]

Mature dsi-miR-9369-3p

Accession	MIMAT0039119
Description	Drosophila simulans dsi-miR-9369-3p mature miRNA
Sequence	40 - AUACAUAUUCUUCUUUGGCUU - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250