Stem-loop chi-mir-92b

Accession

MI0030840

Description

Capra hircus chi-mir-92b precursor miRNA

Literature search

17 open access papers mention chi-mir-92b
(29 sentences)

Sequence

500312 reads, 1606.0 reads per million, 36 experiments

cccauucauucauggguggggauuuguugcacugcuuguguuauauguaaagUAUUGCACUUGUCCCGGCCUGUggaagaaacgagg
....(((.(((((((((.(((((..((.(((.(((((............))))).)))))..))))).))))))))).)))......

Structure

--ccca   a         g     uu  u   c     guguu 
      uuc uucaugggu gggau  gu gca ugcuu     a
      ||| ||||||||| |||||  || ||| |||||      
      aag aggUGUCCG CCCUG  CA CGU AUgaa     u
ggagca   a         G     UU  -   U     augua 

Annotation confidence Not enough data

Genome context

chrX: 40074814-40074900 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from chi-mir-92b

Mature chi-miR-92b-3p

• Accession: MIMAT0036304
• Description: Capra hircus chi-miR-92b-3p mature miRNA
• Sequence: 53 - UAUUGCACUUGUCCCGGCCUGU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40