miRBase entry: chi-mir-34a

Stem-loop chi-mir-34a


Accession
MI0030757
Description
Capra hircus chi-mir-34a precursor miRNA
Gene family
MIPF0000039; mir-34

Literature search
5 open access papers mention chi-mir-34a
(9 sentences)

Sequence

ggccagcugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUugugaguaauaaugcaggaagcaaucagcaaguauacugcccuagaagugcugcacguuguggg
..(((..(((((((((((((..(((((((((((.((((((((((....(((....)))....))))))))))))).))))))))..))))))))).))))...))).

Structure
gg   -gc    -         uU        -   A          guga   a 
  cca   ugug aguguuucu  GGCAGUGU CUU GCUGGUUGUu    gua u
  |||   |||| |||||||||  |||||||| ||| ||||||||||    |||  
  ggu   gcac ucgugaaga  ccgucaua gaa cgacuaacga    cgu a
-g   guu    g         uc        u   -          agga   a 


Annotation confidence Not enough data
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Genome context
chr16: 44326265-44326371 [+]

Database links

Mature chi-miR-34a

Accession MIMAT0036166
Description Capra hircus chi-miR-34a mature miRNA
Sequence 22 - UGGCAGUGUCUUAGCUGGUUGU - 43
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40