Stem-loop chi-mir-29a

Accession

MI0030726

Description

Capra hircus chi-mir-29a precursor miRNA

Literature search

92 open access papers mention chi-mir-29a
(440 sentences)

Sequence

1598646 reads, 4942.0 reads per million, 36 experiments

ccccuuagaggaugACUGAUUUCUUUUGGUGUUCAGagucaauauaauuuucUAGCACCAUCUGAAAUCGGUUauaaugauugggga
((((....(..((((((((((((...(((((((.((((...........)))))))))))...))))))))))))..)....)))).

Structure

-    uuag gg            UUU       C    ucaa 
 cccc    a  augACUGAUUUC   UGGUGUU AGag    u
 ||||    |  ||||||||||||   ||||||| ||||    a
 gggg    u  uaUUGGCUAAAG   ACCACGA Ucuu    u
a    uuag aa            UCU       -    uuaa 

Annotation confidence High

Genome context

chr4: 97291653-97291739 [-]

Mature chi-miR-29a-5p

• Accession: MIMAT0036112
• Description: Capra hircus chi-miR-29a-5p mature miRNA
• Sequence: 15 - ACUGAUUUCUUUUGGUGUUCAG - 36
• Evidence: experimental ; Illumina [1]

Mature chi-miR-29a-3p

• Accession: MIMAT0036113
• Description: Capra hircus chi-miR-29a-3p mature miRNA
• Sequence: 53 - UAGCACCAUCUGAAAUCGGUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40