Stem-loop chi-mir-2284b

Accession

MI0030702

Description

Capra hircus chi-mir-2284b precursor miRNA

Literature search

3 open access papers mention chi-mir-2284b
(5 sentences)

Sequence

253 reads, 1.0 reads per million, 36 experiments

cuagguguuggcUGAAAAGUUUGUUCGGGUUaaucuguaccaucuuauagaAAAAUCUGAACAAACUUUauggcuaacccagu
...((.((((((((.((((((((((((((((..((((((......))))))..)))))))))))))))).))))))))))...

Structure

cua  u        A                aa      cc 
   gg guuggcUG AAAGUUUGUUCGGGUU  ucugua  a
   || |||||||| ||||||||||||||||  ||||||   
   cc caaucggu UUUCAAACAAGUCUAA  agauau  u
uga  -        a                AA      uc 

Annotation confidence Medium

Genome context

chrX: 125835369-125835451 [+]

Mature chi-miR-2284b-5p

• Accession: MIMAT0036078
• Description: Capra hircus chi-miR-2284b-5p mature miRNA
• Sequence: 13 - UGAAAAGUUUGUUCGGGUU - 31
• Evidence: experimental ; Illumina [1]

Mature chi-miR-2284b-3p

• Accession: MIMAT0058958
• Description: Capra hircus chi-miR-2284b-3p mature miRNA
• Sequence: 52 - AAAAUCUGAACAAACUUU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40