miRBase entry: chi-mir-22

Stem-loop chi-mir-22


Accession
MI0030700
Description
Capra hircus chi-mir-22 precursor miRNA

Literature search
1 open access papers mention chi-mir-22
(1 sentences)

Sequence

ccucaccuggcugagccgcaguAGUUCUUCAGUGGCAAGCUUUauguccugacccagcuaAAGCUGCCAGUUGAAGAACuguugcccucugccccuggcuu
.....((.(((.(((..((((((((((((((((((((.((((((.((.........))))))))))))).))))))))))))))).))).)))...))...

Structure
ccuca  --u   u   cc               -     A      u  ccu 
     cc   ggc gag  gcaguAGUUCUUCAG UGGCA GCUUUa gu   g
     ||   ||| |||  ||||||||||||||| ||||| |||||| ||   a
     gg   ccg cuc  cguuguCAAGAAGUU ACCGU CGAAau cg   c
--uuc  ucc   u   -c               G     -      -  acc 


Annotation confidence Not enough data
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Genome context
chr19: 23205693-23205793 [-]

Database links

Mature chi-miR-22-5p

Accession MIMAT0036075
Description Capra hircus chi-miR-22-5p mature miRNA
Sequence 23 - AGUUCUUCAGUGGCAAGCUUU - 43
Evidence experimental
Illumina [1]

Mature chi-miR-22-3p

Accession MIMAT0036076
Description Capra hircus chi-miR-22-3p mature miRNA
Sequence 61 - AAGCUGCCAGUUGAAGAAC - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40