Stem-loop chi-mir-193a

Accession

MI0030666

Description

Capra hircus chi-mir-193a precursor miRNA

Literature search

28 open access papers mention chi-mir-193a
(197 sentences)

Sequence

97756 reads, 311.0 reads per million, 36 experiments

gcuguggucccagaauCGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCUUuuggggucauucu
...((((((((((((.((((((((((.((((.((.((.((.........)).)).)).)))).)))))))))).))))))))))))...

Structure

gcu            u          A    G  A  A  uua 
   guggucccagaa CGGGGUUUUG GGGC AG UG gu   u
   |||||||||||| |||||||||| |||| || || ||   g
   uacugggguuUU GCCCUGAAAC CCCG UC Ac ua   u
ucu            C          A    G  A  c  uuu 

Annotation confidence High

Genome context

chr25: 14799777-14799865 [+]

Mature chi-miR-193a-5p

• Accession: MIMAT0058946
• Description: Capra hircus chi-miR-193a-5p mature miRNA
• Sequence: 17 - CGGGGUUUUGAGGGCGAGAUGA - 38
• Evidence: experimental ; Illumina [1]

Mature chi-miR-193a-3p

• Accession: MIMAT0036026
• Description: Capra hircus chi-miR-193a-3p mature miRNA
• Sequence: 54 - AACUGGCCCACAAAGUCCCGCUU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40