Stem-loop chi-mir-186

Accession

MI0030657

Description

Capra hircus chi-mir-186 precursor miRNA

Literature search

22 open access papers mention chi-mir-186
(170 sentences)

Sequence

3099439 reads, 9696.0 reads per million, 36 experiments

ugcuuauaacuuucCAAAGAAUUCUCCUUUUGGGCUUucugauuuuauuuuaaGCCCAAAGGUGAAUUUUUUGGGaaguuugagcu
.(((((.(((((((((((((((((.(((((.((((((..............))))))))))).)))))))))))))))))))))).

Structure

u     u                 U     U      ucugau 
 gcuua aacuuucCAAAGAAUUC CCUUU GGGCUU      u
 ||||| ||||||||||||||||| ||||| ||||||       
 cgagu uugaaGGGUUUUUUAAG GGAAA CCCGaa      u
u     -                 U     -      uuuuau 

Annotation confidence High

Genome context

chr3: 75062898-75062983 [+]

Mature chi-miR-186-5p

• Accession: MIMAT0036010
• Description: Capra hircus chi-miR-186-5p mature miRNA
• Sequence: 15 - CAAAGAAUUCUCCUUUUGGGCUU - 37
• Evidence: experimental ; Illumina [1]

Mature chi-miR-186-3p

• Accession: MIMAT0036011
• Description: Capra hircus chi-miR-186-3p mature miRNA
• Sequence: 54 - GCCCAAAGGUGAAUUUUUUGGG - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40