Stem-loop chi-mir-181b

Accession

MI0030650

Description

Capra hircus chi-mir-181b precursor miRNA

Literature search

47 open access papers mention chi-mir-181b
(190 sentences)

Sequence

123281 reads, 386.0 reads per million, 36 experiments

cugauggcugcacucAACAUUCAUUGCUGUCGGUGGGUUugacuuugaaucaaCUCACUGAUCAAUGAAUGCAaacugcggaccaaaca
....((((((((.....(((((((((..(((((((((((.((.......)))))))))))))))))))))).....))))).)))....

Structure

cuga   -     cucAA         CU           u  cu 
    ugg cugca     CAUUCAUUG  GUCGGUGGGUU ga  u
    ||| |||||     |||||||||  ||||||||||| ||  u
    acc ggcgu     GUAAGUAAC  UAGUCACUCaa cu  g
acaa   a     caaAC         --           -  aa 

Annotation confidence High

Genome context

chr11: 98560989-98561077 [+]

Mature chi-miR-181b-5p

• Accession: MIMAT0036001
• Description: Capra hircus chi-miR-181b-5p mature miRNA
• Sequence: 16 - AACAUUCAUUGCUGUCGGUGGGUU - 39
• Evidence: experimental ; Illumina [1]

Mature chi-miR-181b-3p

• Accession: MIMAT0036002
• Description: Capra hircus chi-miR-181b-3p mature miRNA
• Sequence: 54 - CUCACUGAUCAAUGAAUGCA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40