Stem-loop chi-mir-155

Accession

MI0030643

Description

Capra hircus chi-mir-155 precursor miRNA

Literature search

8 open access papers mention chi-mir-155
(16 sentences)

Sequence

uugcugugggcugugugcuaUUAAUGCUAAUCGUGAUAGGGGUuuuuaccucggacugaCUCCUACAUGUUAGCAUUAACAgggcauggcgccuguuac
.......(((((((((.((.((((((((((.((((.((((((((....(....)...)))))))))))))))))))))).)).))))))).))......

Structure

uugcugu  -       g  a          U    A        uuua c 
       gg gcugugu cu UUAAUGCUAA CGUG UAGGGGUu    c u
       || ||||||| || |||||||||| |||| ||||||||    |  
       cc cgguacg gA AAUUACGAUU GUAC AUCCUCag    g c
-cauugu  g       g  C          -    -        -uca g 

Annotation confidence Not enough data

Genome context

chr1: 10688698-10688796 [-]

Mature chi-miR-155-5p

• Accession: MIMAT0035988
• Description: Capra hircus chi-miR-155-5p mature miRNA
• Sequence: 21 - UUAAUGCUAAUCGUGAUAGGGGU - 43
• Evidence: experimental ; Illumina [1]

Mature chi-miR-155-3p

• Accession: MIMAT0035989
• Description: Capra hircus chi-miR-155-3p mature miRNA
• Sequence: 60 - CUCCUACAUGUUAGCAUUAACA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40