Stem-loop chi-mir-137

Accession

MI0030625

Description

Capra hircus chi-mir-137 precursor miRNA

Literature search

47 open access papers mention chi-mir-137
(181 sentences)

Sequence

127 reads, 1.0 reads per million, 23 experiments

gguccucugacucucuucggugacggguauucuuggguggauaauacggauuacguuguuAUUGCUUAAGAAUACGCGUAGUcgaggagaguaccagcggcaggc
.(.((.((((((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..)))))))))))..))).)))....

Structure

---g u  u   --           ug   g             g      -  g 
    g cc cug  acucucuucgg  acg guauucuugggug auaaua cg a
    | || |||  |||||||||||  ||| ||||||||||||| |||||| || u
    c gg gac  ugagaggagcU  UGC CAUAAGAAUUCGU UAuugu gc u
cgga -  c   ca           GA   G             -      u  a 

Annotation confidence Not enough data

Genome context

chr3: 47943784-47943888 [+]

Mature chi-miR-137-3p

• Accession: MIMAT0035957
• Description: Capra hircus chi-miR-137-3p mature miRNA
• Sequence: 61 - AUUGCUUAAGAAUACGCGUAGU - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40