Stem-loop chi-mir-101

Accession

MI0030589

Description

Capra hircus chi-mir-101 precursor miRNA

Literature search

62 open access papers mention chi-mir-101
(527 sentences)

Sequence

4270308 reads, 13132.0 reads per million, 36 experiments

aggcugcccuggcuCAGUUAUCACAGUGCUGAUGCUGuccauucuaaaggUACAGUACUGUGAUAACUGAaggauggcagcca
.(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))))).

Structure

a       cuggc                  A    Gucca 
 ggcugcc     uCAGUUAUCACAGUGCUG UGCU     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uagga                  -    aaauc 

Annotation confidence High

Genome context

chr3: 81377563-81377645 [+]

Mature chi-miR-101-5p

• Accession: MIMAT0035899
• Description: Capra hircus chi-miR-101-5p mature miRNA
• Sequence: 15 - CAGUUAUCACAGUGCUGAUGCUG - 37
• Evidence: experimental ; Illumina [1]

Mature chi-miR-101-3p

• Accession: MIMAT0035900
• Description: Capra hircus chi-miR-101-3p mature miRNA
• Sequence: 51 - UACAGUACUGUGAUAACUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40