Stem-loop bra-MIR164d

Accession

MI0030572

Description

Brassica rapa bra-MIR164d precursor miRNA

Literature search

10 open access papers mention bra-MIR164d
(24 sentences)

Sequence

guaucacuugcUGGAGAAGCAGGGCACGUGCGaacaaaugaguuugagcaguacauuuugaucaaauauucgCACGUGUUCUACUACUCCAACacguguaucuccccuuc
....(((.((.(((((.((.((((((((((((((.......((((((.(((......))).)))))).)))))))))))))).)).))))).)).)))............

Structure

--------guau   u  c     A  C              caaauga      g   ua 
            cac ug UGGAG AG AGGGCACGUGCGaa       guuuga cag  c
            ||| || ||||| || ||||||||||||||       |||||| |||   
            gug aC ACCUC UC UCUUGUGCACgcuu       uaaacu guu  a
cuuccccucuau   c  A     A  A              ------a      a   uu 

Annotation confidence Not enough data

Genome context

chrA6: 18241365-18241474 [-]

Mature bra-miR164d-5p

• Accession: MIMAT0035866
• Description: Brassica rapa bra-miR164d-5p mature miRNA
• Sequence: 12 - UGGAGAAGCAGGGCACGUGCG - 32
• Evidence: experimental ; Illumina [1]

Mature bra-miR164d-3p

• Accession: MIMAT0035867
• Description: Brassica rapa bra-miR164d-3p mature miRNA
• Sequence: 73 - CACGUGUUCUACUACUCCAAC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146