Stem-loop bra-MIR395a

Accession

MI0030564

Description

Brassica rapa bra-MIR395a precursor miRNA

Literature search

6 open access papers mention bra-MIR395a
(16 sentences)

Sequence

augucuccuagaGUUCCUCUGAGCACUUCAUUGgguauacaauuucuuaugaagauuacccaCUGAAGUGUUUGGGGGAACUCcuggacccau
(((..(((..((((((((((((((((((((.((((((.....((((....))))..)))))).))))))))))))))))))))..)))..)))

Structure

   uc   ua                    U      uacaa    u 
aug  ucc  gaGUUCCUCUGAGCACUUCA UGggua     uuuc u
|||  |||  |||||||||||||||||||| ||||||     ||||  
uac  agg  CUCAAGGGGGUUUGUGAAGU acccau     gaag a
   cc   uc                    C      ---ua    u 

Annotation confidence Not enough data

Genome context

chrA8: 17814983-17815075 [-]

Mature bra-miR395a-5p

• Accession: MIMAT0035850
• Description: Brassica rapa bra-miR395a-5p mature miRNA
• Sequence: 13 - GUUCCUCUGAGCACUUCAUUG - 33
• Evidence: experimental ; Illumina [1]

Mature bra-miR395a-3p

• Accession: MIMAT0035851
• Description: Brassica rapa bra-miR395a-3p mature miRNA
• Sequence: 63 - CUGAAGUGUUUGGGGGAACUC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146