Stem-loop bra-MIR391

Accession

MI0030560

Description

Brassica rapa bra-MIR391 precursor miRNA

Literature search

2 open access papers mention bra-MIR391
(4 sentences)

Sequence

gcaaauaaagguucgcUUCGCAGGAGAGAUAGCGCCAucacuucuucuuaagaguuuagaagauggugACGGUAUCUCUCCUACGUAGCaauccuuauauaugc
(((.(((((((...(((.((.((((((((((.((.(((((..((((((.........))))))))))).)).)))))))))).)).)))...)))).))).)))

Structure

   a   -    uuc   U  C          G  C     cu      uaa 
gca aua aagg   gcU CG AGGAGAGAUA CG CAuca  ucuucu   g
||| ||| ||||   ||| || |||||||||| || |||||  ||||||   a
cgu uau uucc   CGA GC UCCUCUCUAU GC guggu  agaaga   g
   a   a    uaa   U  A          G  A     --      uuu 

Annotation confidence Not enough data

Genome context

chrA10: 9284925-9285028 [+]

Mature bra-miR391-5p

• Accession: MIMAT0035842
• Description: Brassica rapa bra-miR391-5p mature miRNA
• Sequence: 17 - UUCGCAGGAGAGAUAGCGCCA - 37
• Evidence: experimental ; Illumina [1]

Mature bra-miR391-3p

• Accession: MIMAT0035843
• Description: Brassica rapa bra-miR391-3p mature miRNA
• Sequence: 69 - ACGGUAUCUCUCCUACGUAGC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146