Stem-loop rno-mir-1956

Accession

MI0030356

Description

Rattus norvegicus rno-mir-1956 precursor miRNA

Sequence

280 reads, 1 reads per million, 139 experiments

ucAGUCCAGGGCUGAGUCAGCGGAgcccggaguggcuucccUGGCUGGCACCUGGACGUaggc
...((((((((((.((((((.((((((......)))))).))))))))).)))))))......

Structure

---ucA       -   G      C      cg 
      GUCCAGG GCU AGUCAG GGAgcc  g
      ||||||| ||| |||||| ||||||   
      CAGGUCC CGG UCGGUc cuucgg  a
cggaUG       A   -      c      ug 

Annotation confidence Not enough data

Genome context

chr2: 243819838-243819900 [+]

Mature rno-miR-1956-5p

• Accession: MIMAT0035735
• Description: Rattus norvegicus rno-miR-1956-5p mature miRNA
• Sequence: 3 - AGUCCAGGGCUGAGUCAGCGGA - 24
• Evidence: experimental ; RNAseq-metaanalysis [1]

Mature rno-miR-1956-3p

• Accession: MIMAT0035736
• Description: Rattus norvegicus rno-miR-1956-3p mature miRNA
• Sequence: 42 - UGGCUGGCACCUGGACGU - 59
• Evidence: experimental ; RNAseq-metaanalysis [1]

References

1. PubMed ID: 23329697
   Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters
   "Uva P, Da Sacco L, Del Corno M, Baldassarre A, Sestili P, Orsini M, Palma A, Gessani S, Masotti A"
   "RNA (2013) 19:365-379