Stem-loop pbv-mir-218-1

Accession

MI0030292

Description

Python bivittatus pbv-mir-218-1 precursor miRNA

Sequence

gcgagauuuucugUUGUGCUUGAUCUAACCAUGUgguugugagguaugcguaAAACAUGGUUCUGUCAAGCACCauggaacgucacgcagcu
(((.(((.((((((.(((((((((..((((((((...(((.......)))....))))))))..))))))))).)))))).))).)))....

Structure

----   a   u      U         CU        -ggu   ga 
    gcg gau uucugU GUGCUUGAU  AACCAUGU    ugu  g
    ||| ||| |||||| |||||||||  ||||||||    |||  g
    cgc cug aaggua CACGAACUG  UUGGUACA    gcg  u
ucga   a   c      C         UC        AAau   ua 

Annotation confidence Not enough data

Genome context

KE953911.1: 123602-123693 [-]

Mature pbv-miR-218-5p

• Accession: MIMAT0039027
• Description: Python bivittatus pbv-miR-218-5p mature miRNA
• Sequence: 14 - UUGUGCUUGAUCUAACCAUGU - 34
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-218-3p

• Accession: MIMAT0039028
• Description: Python bivittatus pbv-miR-218-3p mature miRNA
• Sequence: 53 - AAACAUGGUUCUGUCAAGCACC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196