Stem-loop pbv-mir-204-1

Accession

MI0030278

Description

Python bivittatus pbv-mir-204-1 precursor miRNA

Sequence

aguaccuauucaugugaccuguggacUUCCCUUUGUCAUCCUAUGCCUGagaauauaugaagggGGCUGGGAAGGCAAAGGGACGUUcaguugucauc
.............(((((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...))))).

Structure

aguaccuauucau     cug     U          A     U    Gagaau 
             gugac   uggac UCCCUUUGUC UCCUA GCCU      a
             |||||   ||||| |||||||||| ||||| ||||      u
             uacug   acUUG AGGGAAACGG AGGGU CGGg      a
------------c     uug     C          A     -    ggaagu 

Annotation confidence Not enough data

Genome context

KE955677.1: 99312-99409 [+]

Mature pbv-miR-204-5p

• Accession: MIMAT0039006
• Description: Python bivittatus pbv-miR-204-5p mature miRNA
• Sequence: 27 - UUCCCUUUGUCAUCCUAUGCCUG - 49
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-204-3p

• Accession: MIMAT0039007
• Description: Python bivittatus pbv-miR-204-3p mature miRNA
• Sequence: 65 - GGCUGGGAAGGCAAAGGGACGUU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196