Stem-loop pbv-mir-33-1

Accession

MI0030191

Description

Python bivittatus pbv-mir-33-1 precursor miRNA

Sequence

ggguggcaacuguaGUGCAUUGUAGUUGCAUUGCAuguucuggcaauacucaugCAAUGUUUCUGCAGUGCAGUUcagaggcaugccu
((((.((..(((.(.((((((((((..((((((((((.............))))))))))..)))))))))).).)))..))..))))

Structure

    -g  aa   u G          UU          uucug 
gggu  gc  cug a UGCAUUGUAG  GCAUUGCAug     g
||||  ||  ||| | ||||||||||  ||||||||||     c
uccg  cg  gac U ACGUGACGUC  UGUAACguac     a
    ua  ga   U G          UU          ucaua 

Annotation confidence Not enough data

Genome context

KE955944.1: 80254-80341 [-]

Mature pbv-miR-33-5p

• Accession: MIMAT0038882
• Description: Python bivittatus pbv-miR-33-5p mature miRNA
• Sequence: 15 - GUGCAUUGUAGUUGCAUUGCA - 35
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-33-3p

• Accession: MIMAT0038883
• Description: Python bivittatus pbv-miR-33-3p mature miRNA
• Sequence: 55 - CAAUGUUUCUGCAGUGCAGUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196