Stem-loop pbv-mir-9-1

Accession

MI0030149

Description

Python bivittatus pbv-mir-9-1 precursor miRNA

Sequence

ggguugguuguuaUCUUUGGUUAUCUAGCUGUAUGaguggggucaagucuucaUAAAGCUAGAUAACCGAAAGUAaaaa
..........((((.(((((((((((((((.((((((.((.......)))))))).))))))))))))))).))))...

Structure

ggguugguug    C               G      u  gg 
          uuaU UUUGGUUAUCUAGCU UAUGag gg  u
          |||| ||||||||||||||| |||||| ||  c
          aAUG AAGCCAAUAGAUCGA AUacuu cu  a
-------aaa    A               A      -  ga 

Annotation confidence Not enough data

Genome context

KE964242.1: 3411-3489 [+]

Mature pbv-miR-9-5p

• Accession: MIMAT0038821
• Description: Python bivittatus pbv-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUG - 35
• Evidence: experimental ; Illumina [1]

Mature pbv-miR-9-3p

• Accession: MIMAT0038822
• Description: Python bivittatus pbv-miR-9-3p mature miRNA
• Sequence: 54 - UAAAGCUAGAUAACCGAAAGUA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196