Stem-loop cli-mir-9646

Accession

MI0030126

Description

Columba livia cli-mir-9646 precursor miRNA

Sequence

uuagagugguauuuagacCGAUUGUUGGUAGUGUUCUUUAuaaaaacgauaAAGAACACUACCAACGACCGGUcuaaaugccacuuauc
...(((((((((((((((((.((((((((((((((((((((.......)))))))))))))))))))).)))))))))))))))))...

Structure

uua                 A                    aa 
   gagugguauuuagacCG UUGUUGGUAGUGUUCUUUAu  a
   ||||||||||||||||| ||||||||||||||||||||  a
   uucaccguaaaucUGGC AGCAACCAUCACAAGAAaua  a
cua                 C                    gc 

Annotation confidence Not enough data

Genome context

KB375350.1: 3459158-3459246 [-]

Mature cli-miR-9646-5p

• Accession: MIMAT0038785
• Description: Columba livia cli-miR-9646-5p mature miRNA
• Sequence: 19 - CGAUUGUUGGUAGUGUUCUUUA - 40
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9646-3p

• Accession: MIMAT0038786
• Description: Columba livia cli-miR-9646-3p mature miRNA
• Sequence: 52 - AAGAACACUACCAACGACCGGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196