Stem-loop cli-mir-9645

Accession

MI0030125

Description

Columba livia cli-mir-9645 precursor miRNA

Sequence

ccugugcagcacuUGCCACCACAGUGGGCUGCUGCaggacacauagcCGGAGCACACGGUGGUGGUACCagugcuggaucug
...((.((((((((((((((((.(((.(((.(.((..........)).).))).))).)))))))))..))))))).))...

Structure

ccu  g       --         A   G   G U  agga 
   gu cagcacu  UGCCACCAC GUG GCU C GC    c
   || |||||||  ||||||||| ||| ||| | ||     
   ua gucguga  AUGGUGGUG CAC CGA G cg    a
guc  g       CC         G   A   G C  auac 

Annotation confidence Not enough data

Genome context

KB375299.1: 2361600-2361681 [-]

Mature cli-miR-9645-5p

• Accession: MIMAT0038783
• Description: Columba livia cli-miR-9645-5p mature miRNA
• Sequence: 14 - UGCCACCACAGUGGGCUGCUGC - 35
• Evidence: experimental ; Illumina [1]

Mature cli-miR-9645-3p

• Accession: MIMAT0038784
• Description: Columba livia cli-miR-9645-3p mature miRNA
• Sequence: 48 - CGGAGCACACGGUGGUGGUACC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196