miRBase entry: cli-mir-9644

Stem-loop cli-mir-9644


Accession
MI0030124
Description
Columba livia cli-mir-9644 precursor miRNA


Sequence

uugcccagaggUGGUGUGGGGUUUGGAUCUCAGuuaaaaucucacuGGAGACCAUACUGCACAGCCUUCucuagguga
(((((.(((((.((((((.(((.(((.(((((((.........))).))))))).))).)))).)).))))).)))))

Structure
     c     U  -    G   U   A    -   uaa 
uugcc agagg GG UGUG GGU UGG UCUC AGu   a
||||| ||||| || |||| ||| ||| |||| |||   a
agugg ucuCU CC ACAC UCA ACC AGAG uca   u
     a     U  G    G   U   -    G   cuc 


Annotation confidence Not enough data
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Genome context
KB375804.1: 12247013-12247090 [+]

Database links

Mature cli-miR-9644-5p

Accession MIMAT0038781
Description Columba livia cli-miR-9644-5p mature miRNA
Sequence 12 - UGGUGUGGGGUUUGGAUCUCAG - 33
Evidence experimental
Illumina [1]

Mature cli-miR-9644-3p

Accession MIMAT0038782
Description Columba livia cli-miR-9644-3p mature miRNA
Sequence 47 - GGAGACCAUACUGCACAGCCUUC - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196