miRBase entry: cli-mir-9643

Stem-loop cli-mir-9643


Accession
MI0030123
Description
Columba livia cli-mir-9643 precursor miRNA


Sequence

cugugguaccgacccugCGCGGCCGGUACUGAUCCUGCAguaccaacccugUGCGGCCGGUACUGACCCUGCAuggcugguaccaauc
...((((((((.((.((((.((.((((((((..(((((((........))))).)).)))))))).)).)))).)).))))))))...

Structure
cug        a  c    C  C        AU  -     uac 
   ugguaccg cc ugCG GG CGGUACUG  CC UGCAg   c
   |||||||| || |||| || ||||||||  || |||||    
   accauggu gg ACGU CC GUCAUGGC  GG GUguc   a
cua        c  u    C  A        -C  C     cca 


Annotation confidence Not enough data
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Genome context
KB375451.1: 66187-66274 [+]

Database links

Mature cli-miR-9643-5p

Accession MIMAT0038779
Description Columba livia cli-miR-9643-5p mature miRNA
Sequence 18 - CGCGGCCGGUACUGAUCCUGCA - 39
Evidence experimental
Illumina [1]

Mature cli-miR-9643-3p

Accession MIMAT0038780
Description Columba livia cli-miR-9643-3p mature miRNA
Sequence 52 - UGCGGCCGGUACUGACCCUGCA - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196